Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015930349.1_cds_XP_016477396.1_69132
CDS Infomation

[gene=LOC107798879] [db_xref=GeneID:107798879] [protein=chloride channel protein CLC-f-like isoform X2] [protein_id=XP_016477396.1] [location=join(2648..2962,3505..3907,4680..4874,5598..6052,6161..6265,8568..8804,8982..9194,9346..9578,10536..10617)] [gbkey=CDS]
Sequence

ATGACGGGAGGCGAGTACAGCGATCACAATGTTTTATTACGTTCTACTTCATCGGCGTCA
GAAGGCGATTTAGAAAGCCAGTCGCCGAGGAGAACGAATACCAGAAGCATTAAGGATCTA
TTAAAGCGGTTGGATCGAGGGTTTTCGGGTCGGCGATCAGAGAGGGACCAAAACTCGTCG
TCTTCTCCTTCTTCTAATCGCGGTGTTTCGGATGAAGTTCTCGGCGATAGTGCTCCACCG
GAATGGGCGATGTTGCTTGTTGGATGTCTCCTTGGCCTTGCTACTGGCCTTTGTGTTGCT
GCCTTTAACCGCGGGGTACACGTAATACACGAGTGGGCGTGGGCTGGTACTCCTAATGAT
GGTGCTGCTTGGCTTCGTTTGCAAAGGCTAGCTGATACTTGGCACCGGATACTTTTAATA
CCAGTTTTGGGTGGAGTCATTGTTGGCATGCTGCATGGTCTGCTTGAAATATTGGACCAA
ATAACACAGTCCAGCTCTTCTCAGGGACAAGGATTTGATTTGATTGCTGGAATCTTCCCT
ACAGTGAAGGCCACTCAGGCTGCTATCACTCTGGGTACTGGTTGTTCTTTGGGTCCTGAA
GGCCCTAGTGTAGATATTGGGAAGTCATGTGCCTATGGATGCTCCATGATGATGGAAAAC
AACCGGGAAAGGAGAATAGCTCTCATTGCAGCTGGTGCAGCTGCTGGAATTGCTTCAGGT
TTCAATGCAGCGGTAGCAGGTTCTTTCTTTGCGATTGAAACAGTTTTAAGACCACTCCGT
GCAGAAAATTCACCCCCATTTACAACTGCAATGATCATATTGGCTTCTGTTATATCATCA
ACTGTATCAAATGCAGTACTTGGAGAGAAACAGGCTTTCACAGTGCCCACGTATGATATG
AAATCTGCTGCTGAGCTTCCATTGTATCTGATACTGGGGATGCTGTGTGGAGTAGTAAGT
GTGGCTTTCACTCGATTGGTGTCCTGGTTCACCAAGGGGTTTCAGTTCCTCAAGGAAAAA
TTTGGACTTCCTGATGTTGTCTGCCCTGCCTTGGGGGGTTTAGGAGCTGGTGTAATAGCT
CTTAGATATCCTGGAATTCTCTATTGGGGTTTCACTAATGTTGATGAAATCCTTCATACT
GGGAAGACTGCATCTGCACCTGGAATCGGATTGCTAGCCCAATTAGTTGCTGCTAAAGTC
GTGGCCACTGCTTTGTGCAAAGGGTCTGGCCTTGTTGGTGGATTGTATGCACCAAGCTTA
ATGATAGGTGCTGCTGTAGGTGCTGTATTTGGAGGGCTAGCTGGGGAACTAATAAATTCA
GCTATTCCAGGGAATGCTGCTATTGCCCAGCCACAGGCATATGCACTGGTGGGAATGGCT
GCTACACTAGCTTCCGTTTGCTCAGTGCCTTTGACTTCAGTGCTCTTATTGTTTGAGTTG
ACAAAAGATTATAGAATTTTGCTTCCTCTCATGGGTGCTGTTGGACTGGCAATATGGGTG
CCTTCTGTTACAGACCAGCCAAAGGAAACGGAGGTATCAGAAGCGAAATTTGCATCAAAA
GGTTACTCAATTCTTTCACCGGTTGATGAGAAAAATGAAGGGAATGTTCCGAGGAAATCT
GGTGAGGGAAATGACTTGGAACTATTGGTGATTGGGAGTCATAATAGTCGTGAATCATTT
GATGAAGGTCTCATTCTGGAAGATCTAAAGGTTTCTCAGGCCATGTCAAATGATTATTTG
AAGGTCTCTCCAAGCCAAACTGTGAAAGAAGCTTTAGAGTGCATGCATGACGGCCAACAG
AATTGCGTTGTTGTGGTTGATGCTGAAGGTTACTTGGAAGGAATTTTAACATATGGTGAC
GTCAAAAGAAGTTTGTTTAAGAGCCATGGGGATTCTTCTAACAGTGATTTATCAGTCACA
GATGCAAATACTTGTCTTGTGTCCTCTATATGCATAAGAGGAATAAGCTATCGTGGCCAA
GATTGTGGACTCCTAACTTGTTATCCTGATACGGATCTAGCAACTGCAAAGCAACTAATG
GAGGCCAAAGGAATTAAACAATTGCCTGTGGTCAAACGTGGTGGAGAATTCAGAAGAGAA
AGAAAGCGCAGAACTATTGCTATTTTGCGTTATGATTCAATAGAGGAGTCAATCAGGAGT
GAAGTGAGTCGCCGAAAGTCAGTCTACCAGCAGAGTGAAGAAGATAATGACAAGCAGATC
GTAACAAATGGCCATTAA

Peptide Sequence

PEP ID

XP_016477396.1
PEP Infomation

PREDICTED: chloride channel protein CLC-f-like isoform X2 [Nicotiana tabacum]
Sequence

MTGGEYSDHNVLLRSTSSASEGDLESQSPRRTNTRSIKDLLKRLDRGFSGRRSERDQNSS
SSPSSNRGVSDEVLGDSAPPEWAMLLVGCLLGLATGLCVAAFNRGVHVIHEWAWAGTPND
GAAWLRLQRLADTWHRILLIPVLGGVIVGMLHGLLEILDQITQSSSSQGQGFDLIAGIFP
TVKATQAAITLGTGCSLGPEGPSVDIGKSCAYGCSMMMENNRERRIALIAAGAAAGIASG
FNAAVAGSFFAIETVLRPLRAENSPPFTTAMIILASVISSTVSNAVLGEKQAFTVPTYDM
KSAAELPLYLILGMLCGVVSVAFTRLVSWFTKGFQFLKEKFGLPDVVCPALGGLGAGVIA
LRYPGILYWGFTNVDEILHTGKTASAPGIGLLAQLVAAKVVATALCKGSGLVGGLYAPSL
MIGAAVGAVFGGLAGELINSAIPGNAAIAQPQAYALVGMAATLASVCSVPLTSVLLLFEL
TKDYRILLPLMGAVGLAIWVPSVTDQPKETEVSEAKFASKGYSILSPVDEKNEGNVPRKS
GEGNDLELLVIGSHNSRESFDEGLILEDLKVSQAMSNDYLKVSPSQTVKEALECMHDGQQ
NCVVVVDAEGYLEGILTYGDVKRSLFKSHGDSSNSDLSVTDANTCLVSSICIRGISYRGQ
DCGLLTCYPDTDLATAKQLMEAKGIKQLPVVKRGGEFRRERKRRTIAILRYDSIEESIRS
EVSRRKSVYQQSEEDNDKQIVTNGH

Transcript Sequence

Gene sequence data has not been registered.